Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932392.1_cds_XP_016478909.1_70504
CDS Infomation

[gene=LOC107800279] [db_xref=GeneID:107800279] [protein=uncharacterized protein At1g04910-like isoform X2] [protein_id=XP_016478909.1] [location=complement(join(36022..36220,36353..36829,37516..37748,37946..38078,40212..40300,40387..40457,40545..40617,40706..40873,41634..42128))] [gbkey=CDS]
Sequence

ATGGGGCATCACCATAACAACCACCATAGCCACCACCACAGCACCGCCACAGATGGCGTT
CCGCAGCGGGTCAACAGCCCACGATTTTCGGGTCCAATGACTCGAAGAGCCCACTCTTTC
AAACGCAACAATACTAACCAAACTACGCAAAATACAAGTAGTACCAGCAGCACTACTGGT
AGTACTACTTTGAATACTCATCATGAGATTGATGTACTCAACTCACCCAGATCTGAAACA
ACAAATTCGAATCTTGCTGCTGATGGGTATGAGATTTTAGTGGAAAAGAAGCAAACCCAT
TTGAGTAATGTTATTCAAAGGGTGCATTTGAGGAAAAAGTTGGAATCTTTGAGTGTGGAT
TTTGGTTTTGGATTGGAATTGAAAGGGAGGAGGAAGTTGGGCCACTGGATGTTTCTGGTG
TTTTGTGGGATGTGCTTGTTTTTGGGTGTTCTTAAGTTTTGTGCTTATGGATGGTTTGGA
TCTGCTATTGATAGAGATTCATATGACTCACTGGTCAGTCAGCAAAATCTAAGGGATCAA
AGCTCGCATGCCTATAGAAATATGGATGGAGATATCGAAAATGGTGGAGAACGGAATCAT
GTGGAACAGACTCTAAGTATGGTTGCATCAGGCGTGGTTGGTAACCATAACAACATCTTA
GATTATTCAGAAATATGGTTGAAACCTAATAGTGAAAATTTCACTCAATGCATTGAGCGG
ACAAAGAGTCAGAAACTGGTTGATGCAAAGACAAATGGTTACCTTCTGATAAATGCAAAT
GGTGGCTTAAATCAAATGAGATTTGGGATCTGTGATATGGTAGCTGTTGCTAAAATCATG
AAGGCAACTCTTGTGCTTCCATCTCTTGATCATACATCCTACTGGGCAGATGAAAGTGGC
TTCAAAGATCTTTTTGACTGGAAGCACTTCATTGAAACTCTGAAGGATGACATCCACATT
GTCGAGACATTACCACCAGAATTTGCTGGAACTGAGCCTTTTAACAAAACACCAATATCT
TGGTCTAAGGTTAGTTATTATAAATCAGAGGTCCTCCCTCTTTTGAAGCAGCACAAAGTA
ATGTATTTTACTCATACTGATTCTCGGATAGCCAACAATGGGATTCCCTATTCTATTCAG
AAGCTGAGATGCCGTGTAAATTACCAAGCACTAAAATACTCTGCGCCGATAGAAAATTTG
GGAAGGATTCTGGTTTCAAGGATGCGACAAGATGGAAGTCCTTATCTTGCTCTCCATTTA
AGGTATGAGAAGGATATGCTTGCTTTTACAGGCTGCAGTCATAATTTGACAGCTGAAGAG
GATGAAGAACTCCGTAGGATGCGCTATGAGGTCGGGCATTGGAAAGAAAAGGAAATTGAT
GGTGCAGAAAAAAGAAAGCTTGGTGGTTGCCCTTTGACCCCGAGGGAGACTGCCCTTCTG
CTTAAGGGTCTGGGATTCCCGTCGAGCACCAGGATTTACATGGTGGCTGGTGAAGCTTAT
GGGAACGGAAGCATGGAACCTCTTCTGGATAATTTCCCAAACATCTTTTCCCATTCAACT
CTTTCAACGGAGGAGGAATTGAATCCTTTTGAGCATCACCAAAATATGCTGGCTGGTTTG
GACTATGTTGTTGCTCTTCAGAGTGATGTTTTCCTTTACACCTACGATGGAAATATGGCT
AAGGCAGTGCAAGGTCATAGGCGCTTTGAAAACTTTAAGAAAACTATTAGTCCAGACAGG
ATGAATTTTGTGAAGCTAGTTGATGAACTTGATAATGGTAAGATTTCGTGGGAGAAATTC
AGCTCCAAAGTAAAAAAGCTTCATGAGCCTCGTGCTGGTGCTCCTTACACGAGGGAGCCA
GGTGAATTTCCGAAGCTGGAAGAGAGCTTTTATGCGAATCCCTTTCCTGGCTGTATATGC
GAGAAAACATATAGATAG

Peptide Sequence

PEP ID

XP_016478909.1
PEP Infomation

PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Nicotiana tabacum]
Sequence

MGHHHNNHHSHHHSTATDGVPQRVNSPRFSGPMTRRAHSFKRNNTNQTTQNTSSTSSTTG
STTLNTHHEIDVLNSPRSETTNSNLAADGYEILVEKKQTHLSNVIQRVHLRKKLESLSVD
FGFGLELKGRRKLGHWMFLVFCGMCLFLGVLKFCAYGWFGSAIDRDSYDSLVSQQNLRDQ
SSHAYRNMDGDIENGGERNHVEQTLSMVASGVVGNHNNILDYSEIWLKPNSENFTQCIER
TKSQKLVDAKTNGYLLINANGGLNQMRFGICDMVAVAKIMKATLVLPSLDHTSYWADESG
FKDLFDWKHFIETLKDDIHIVETLPPEFAGTEPFNKTPISWSKVSYYKSEVLPLLKQHKV
MYFTHTDSRIANNGIPYSIQKLRCRVNYQALKYSAPIENLGRILVSRMRQDGSPYLALHL
RYEKDMLAFTGCSHNLTAEEDEELRRMRYEVGHWKEKEIDGAEKRKLGGCPLTPRETALL
LKGLGFPSSTRIYMVAGEAYGNGSMEPLLDNFPNIFSHSTLSTEEELNPFEHHQNMLAGL
DYVVALQSDVFLYTYDGNMAKAVQGHRRFENFKKTISPDRMNFVKLVDELDNGKISWEKF
SSKVKKLHEPRAGAPYTREPGEFPKLEESFYANPFPGCICEKTYR

Transcript Sequence

Gene sequence data has not been registered.